PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do021595.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 347aa    MW: 36449.1 Da    PI: 6.958
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do021595.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_175.38.1e-24248310163
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv  L+a N +L++el++lkk ++ +++e+
  Do021595.1 248 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVTDLTAINGTLRSELDQLKKACEDMQAEN 310
                 89*********************************************************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-16243307No hitNo description
PfamPF001702.1E-21248310IPR004827Basic-leucine zipper domain
SMARTSM003381.8E-20248312IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.576250313IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-10251305No hitNo description
CDDcd147021.30E-19253303No hitNo description
PROSITE patternPS000360255270IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MASSASTTSG EERPSGAPRD TSAVPGAAAA PPQAHAEWAA SMQAYYATGG QPYAWHAAAQ  60
QHMIAAAAAA GAPYGTPVPF PMSFHPAYYA HPALATGVPY PASDPVAVAE GKSKTKISGA  120
PSVGSAPGSS DGRSEELSDK RDASAEHKLF PSAKRRKSSS ADVQGEPSQA ATMQDAAAKT  180
RSAAKRSSAA KLSVSTPDTE AISNSRPNLN IGMDLWSSSP VKAESSGQGE INAAAPSQHD  240
VALSQMDERE LKRERRKQSN RESARRSRLR KQQECEELAQ KVTDLTAING TLRSELDQLK  300
KACEDMQAEN SQLMGEMDQA EAPCVVTTLS IQIDTSKARH GNNDSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1264270RRSRLRK
2264271RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002466236.11e-142hypothetical protein SORBIDRAFT_01g004080
SwissprotP250329e-70EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLK4AKE41e-158K4AKE4_SETIT; Uncharacterized protein
STRINGSi039367m1e-158(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.14e-31G-box binding factor 1